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RNASA-IMEDIR
Computer Science Faculty
University of A Coruña
Spain

MEIONet @ Bio-AIMS

# Modelling the reality 
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MEIONet
Miocene Estimation with Information of Networks

Model: LDA
Software: S2SNet (for molecular descriptors)
Features: 3 embedded star-graph topological indices (eSh0, eSh1, eSh2)
Accuracy (Ac), Specificity (Sp), Sensitivity (Sn) > 83%
Query DNA sequences (please use three space-delimited columns)
Label1+Space+Label2+Space+Query_DNA_Sequence (maximum 10 sequences)

Groups used for the star-graphs:


Weights

Miocene DNA similarity using Reference Miocene DNA


To be published


Methodology Flow Chart

1 - Calculate the Sh descriptors for the query sequences
2 - Calculate the score with the LDA model using only 3 Sh descriptors of the query and reference DNA sequences
3 - Evaluate the best LDA score for one referece sequence

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Last modified: 19-Nov-2016
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